Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINSQDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDRLYSYVLYNPKIRSHSVQQACLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNGIMFYDHINKENPSYLPPDVDVFG
2AIA Chain:A ((13-192))
LIDMCDIIREGNPSLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPVMAEKMGLRGGVGLAAPQLDISKRIIAVLVPN--AYDLEAIMYNPKIVSHSVQDAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHINGIMFYDRINEKDP-----------
General information:
TITO was launched using:
RESULT:
Template:
2AIA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93890 for 1334 contacts (-70.4/contact) +
2D Compatibility (PS) -18145 + (NN) -6187 + (LL) 320
1D Compatibility (HY) -20400 + (ID) 5150
Total energy: -143452.0 ( -107.54 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_2AIA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AIA-query.scw
PDB file :
Tito_Scwrl_2AIA.pdb
: