Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDKRLFQLVEKKSLVLLILFRVLSLGLMIGLWLVFAQQLTHYLEGQNVDWLWLIGTVLVVLVGKAILTKLAEKQIYQASAELRLSMRRAVMEKAFRLGNNEGQLPASTLTQLAVDGIEQLEIYYSRFLPQLFYCLIASLMIFGSLVGFAWQPAIVLLICMPMIPIVIMAVMKIAKRILSGYWSDYTNLGTKFHENLSGLSILKAYDQDKYKQEEIVSDAERFRKATMS--LLSMQLNSITIMDIISYSGAALGIGMSLIMFT------NGTISMTGMLMFLLLSAEFFIPMRQLGSLFHVAMNGISACSKLFAYLEL---KEQVYGSVELAKPLE-KIEVHHLTYTYEGGKAKALQDVSVHFNKGSFSALVGKSGSGKSTFVRVLLNQLPGYQGEIVWNDVPLASLSGEAIRKQAVLVDNHGYLYANSIRENLLIGNPAANDSDLWNVLEQVSLADFVRKLPEQLNENLEEDGSNLSGGQRQRLLLARALLRQAEVYVFDEITSGVDLESEKIILLVLQELAKEKIVLFISHRLYNVLGADQVLVFDAGKLLEVAS-PERLQQESNYFKNYFLEEEALLKGGA |
| 4RY2 Chain:A ((343-727)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNAKLTSALVESVKGIETIKSFGAEEQTEKSTRDKIETVMKSSFKEGMLYINLSSLT--------GIVAGLGGIVILWAGAYNVIKGNMSGGQLLAFNALLAYFLTPVKNLIDLQPLIQTAVVASNRLGEILELATEKEL------------GDIEFRNVDFRY-GLRKPVLKNINLTIPKGKTVAIVGESGSGKTTLAKLLMNFYSPEKGDILINGHSIKNISLELIRKKIAFVSQDVFIFSGTVKENLCLGNENVDMDEIIKAAKMANAHDFIEKLPLKYDTFLNESGANLSEGQKQRLAIARALLKKPDILILDEATSNLDSITENHIKDAIYGLEDDVTVIIIAHRLSTIVNCDKIYLLKDGEIVESGSHTELIALKGCYFKMWKQTENT------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154554 for 2358 contacts (-65.5/contact) +
2D Compatibility (PS) -39249 + (NN) -18770 + (LL) 21216
1D Compatibility (HY) -26000 + (ID) 5350
Total energy: -222707.0 ( -94.45 by residue)
QMean score : 0.332
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