Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELTKENFQKLDLIHLSLENRHSMSEIIDILSESYIEITQSGVVKDYAYYKSLTTLGDSNLAIMEYDVKILDETKVLSYYKLKNLSENNYTMRSNIWIFENGSWKLTFHQGTRII
1AYI Chain:A ((11-58))
---TEAEFVQL-LKEIEKENVAATDDVLDVLLEHFVKITEHPDGTDLIYYPS---------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1AYI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9129 for 250 contacts (-36.5/contact) +
2D Compatibility (PS) -5121 + (NN) -769 + (LL) 4980
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -14389.0 ( -57.56 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_1AYI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AYI-query.scw
PDB file :
Tito_Scwrl_1AYI.pdb
: