Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKITTASHGGNYNELAKQHGLTKEMVLDFSANINPLGVPASLKQTITANLDKLVEYPEPDYLALRARIASFHQLDLANVIPGNGATE----LIFGIAKVTKAQKVLLLAPTFAEYERAFFDAEIVYAELTKETNFAAVEIVLE-ILERDTEIEAVCLCNPNNPTGQLIAQQEMIKIADLCEKRNIYLIIDEAFMDFLEENETISMINNLERFPHVAIIRAFTKFFAIPGLRLGYLLTKNDLLAEALMQMREPWSINT-FADLAGQMLL-EDEAYIRQTFDWINEERDFLYRGLSRFSAL-TVYRPTVNYIFFHLEKPLDLRKELLLKGIFIRSCANYRGLTENYYRVAVKSRADNSQLLTALEVIFSGN |
1FG3 Chain:A ((34-351)) | ----------------------------LNANEYPTAVEFQLTQ------QTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGK-DAILYCPPTYGMYS---VSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAI-VVADEAYIEFCPQ---ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA-NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRD-QNKQPSLSGCLRITVGTREESQRVIDAL------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -230726 for 2583 contacts (-89.3/contact) +
2D Compatibility (PS) -33800 + (NN) -14810 + (LL) 3396
1D Compatibility (HY) -26000 + (ID) 4600
Total energy: -306540.0 ( -118.68 by residue)
QMean score : 0.452
|
|
|