Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKAILVVSFGTSYPETREKTIEACEKRVAHEFPDYTVFRAFTSNKIIKKLKTRDNMHINTPSQALNQLKELGYKEVIIQSLHIISGGEFEKITAQVEKFKP---DFDSIIVSQPL-LDSMEDYEKAIEAIRHQMPPL-----KEQEALILMGHGSKHHAFSAYACLDHMLL--NEPIYLCAVESYPGLDQVIERLQQADIKKAHLMPFMLVAGDHATNDMASDEENSWKSTLEQAGIQTECHLQGLGENPLIQSQFIDHIHTAIERVKTRG |
| 2XVY Chain:A ((8-267)) | QKTGILLVAFGTSVEEARP-ALDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRAEG-IAAPSPAEALAGMAEEGFTHVAVQSLHTIPGEEFHGLLETAHAFQGLPKGLTRVSVGLPLIGTTA----DA-EAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYYLWRLDPDLLVGTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEAKPVLHGTAESDAVAAIWLRHLDDALAR----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2XVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -188509 for 2135 contacts (-88.3/contact) +
2D Compatibility (PS) -27248 + (NN) -9992 + (LL) 648
1D Compatibility (HY) -16400 + (ID) 4350
Total energy: -245851.0 ( -115.15 by residue)
QMean score : 0.555
|
|
|