Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LVIMVYESGVSEMTENEQNKHEEKALVPSFGLDLLRDYLIPELLGDEAPHIMYWAGKDLARKFPLDSLEEVAEFFEEASWGNFSILKEKKDEMRLLLEGETVAARFRTQEEPTFKLEAGFIAEQLQSQKKLYTESYDEIDKRKKQVTIIVKWDRKETIDNEERY |
3NJC Chain:A ((9-145)) | ------------------IDNLKEIEMNAYAYELIREIVLPDMLGQDYSSMMYWAGKHLARKFPLESWEEFPAFFEEAGWGTLTNVSAKKQELEFELEGPIISNRLKHQKEPCFQLEAGFIAEQIQLMNDQIAESYEQVKKRADKVVLTVKWDMK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NJC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 59247 for 855 contacts (69.3/contact) +
2D Compatibility (PS) -12640 + (NN) 4630 + (LL) 2604
1D Compatibility (HY) 8800 + (ID) 350
Total energy: 62291.0 ( 72.85 by residue)
QMean score : -0.085
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