Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGIIPLWKERGMTSHDCVYKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVTDEGKVYVAEITLGKSTTTEDATGETVNTKELAEISAAELQAALTKLTGKITQIPPMFSAVKVNGKKLYEYARAGIEVERPSRQVDIYSLIRLDGDTALNQSNPTFQLEIACGKGTYIRTLAVMIGELLGYPAHMSKLERTRSGFFKKEDCL-TLTEI--------DEMMQASDSSFLYPLEKGIESMAKLVIEEEVYAKVLNGGLLPTSLFAEVE-----NEPRAALIFKDKLTAIYKPHPEKKDLWKPEKVIELNQA |
| 3LWO Chain:A ((47-301)) | --GVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLH------------------GDVPEDKIIQVMKEFEGEIIQR----------LR---------------TRKVYYIEVLEIEGRDVL--------FRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159479 for 1752 contacts (-91.0/contact) +
2D Compatibility (PS) -24352 + (NN) -2293 + (LL) 4188
1D Compatibility (HY) -16800 + (ID) 4100
Total energy: -202836.0 ( -115.77 by residue)
QMean score : 0.552
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