Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VQQINWKKNVSFRSGSPAFTLLETILSITIILSISLLIPLFFQCYNKTIQLSNIDQTTEWQLFLIQTRLELEKATNIQID--------------------GNKLSFSNG-------------KDLITYSKYNDLVRRQV----N-----GKGHEPLLTNVKDYQLIKKE---------------KQLHLTVQDSNTQIYTSVFALPEVVSNP |
| 3CI0 Chain:J ((11-161)) | -------------------------------------------------------KLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPALLAGAGVLASESEGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIP-ADSLRLQFYDGTRWQESWSSVQAIPVAVRMTLHSPQWGEIERIWLLRG----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -5376 for 608 contacts (-8.8/contact) +
2D Compatibility (PS) -9881 + (NN) 676 + (LL) 4700
1D Compatibility (HY) -4000 + (ID) 500
Total energy: -14381.0 ( -23.65 by residue)
QMean score : 0.436
|
|
|