Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LQDLTLFLEQYKKVIDESLFKEINERNIEP-RLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAEDDNLSFETRIA-LINQISFSSGAEGMVGGQLADLEAEN-KQVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKR---ALNEHVTIAKSALSGHDFDDEILLKLADLIALREN |
3KRP Chain:A ((27-295)) | ----------------------------EPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTK----------------KTTYPKLIGVEKSKEFADRLNREAQ--EQLLHFHPHRAAPLIALANYIAYRDN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89136 for 2046 contacts (-43.6/contact) +
2D Compatibility (PS) -27027 + (NN) -17048 + (LL) 3676
1D Compatibility (HY) -20400 + (ID) 5500
Total energy: -155435.0 ( -75.97 by residue)
QMean score : 0.465
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