Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKIIEVNNVSYHYDKEHALENIHFQVAKGSFTGLIGPNGSGKSTMLKLILGVLKKQQGSISLFGEKQADFKDWVKI---GFVSQKSNAFNSAFPATVKEV----------VASGLTKKKGLF-KTLNNKDKEDIDYALKRVEMTDYLH---RNIGELSGGQQQRVFIARALVSRPELLILDEPTVGVDVENVKAFYELLAELNRTEEMTLLLVTHDLMAVNTYVNHV-ISINKRIIFDGSAHEYQHYLADRELEILAEQRRREDACLDCDASPV
1G6H Chain:A ((6-239))
--EILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRV-YFENKDITNKEPAELYHYGIV----RTFQT--PQPLKEMTVLENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLEL-KAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEE-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1G6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121519 for 1621 contacts (-75.0/contact) +
2D Compatibility (PS) -23804 + (NN) -9603 + (LL) 3168
1D Compatibility (HY) -18400 + (ID) 3750
Total energy: -173908.0 ( -107.28 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_1G6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G6H-query.scw
PDB file :
Tito_Scwrl_1G6H.pdb
: