Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYEYFPGFYDRLMDSELYDEWLEFSADFIGDAPKKVLDLACGTAEFALRLSFSGHQVTGVDLSKEMVAVAKEKVAAAEIDLPIIEQDMSKLALKQT--FDVVTCFCDSLNYLETEQALEATIQAVSAHLEPNGLFLFDVHSVFKIEQGFKDYSYGDSDEEISTIWNSFPGEHPHSIEHELTFYILGEDDTYNRVDELHKERTYPIATYENLLKKFGFTKIDIYADFSHEKPNKTSERIFFAARK |
4KDR Chain:A ((64-163)) | ----------------------------------KKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTC----MEMLEHVPDPQSVVRACAQLVKPGGDVFF----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78097 for 767 contacts (-101.8/contact) +
2D Compatibility (PS) -10909 + (NN) -6604 + (LL) 8180
1D Compatibility (HY) -8400 + (ID) 1550
Total energy: -97380.0 ( -126.96 by residue)
QMean score : 0.563
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