Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPQFFLNKRLIILLISIIVLVALVGFSLRDRENASWPEQFVKDVVGFGENIVAKPTSFISGAVDGVVDLKNTYTENQHLKERLEELAQLESEVADLKKENKDLKESLDITDSIRDYDPLNASVISRNPTNWNDQVEIDKGSSDGVKPDMAVTTPSGLIGKVTTTGAKSATVELLTSSDVKNRVSAKVQGKE-NAFGIINGYDSDTKLLELKQLPYDMKFKKGQKVVTSGLGGKFPAGIFIGTIEKVETDKMGLSQTAFIKPGADMYDLNHVTVLKRSAEAGTTDDDTTSSDTTGGQ
2QF4 Chain:A ((5-169))------------------------------------------------------------------------------------------------------------------ATKTLAADVIMRSPVSWKQELTLDAGRSKGASENMLAIANGGLIGSVSKVEENSTIVNLLTNTENADKISVKIQHGSTTIYGIIIGYDKENDVLKISQLNSNSDISAGDKVTTGGLGNFNVADIPVGEVVATTHSTDYLTREVTVKLSADTHNVDVIELVGNSKL-----------------


General information:
TITO was launched using:
RESULT:

Template: 2QF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41329 for 1301 contacts (-31.8/contact) +
2D Compatibility (PS) -17815 + (NN) -7213 + (LL) 8760
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -68447.0 ( -52.61 by residue)
QMean score : 0.555

(partial model without unconserved sides chains):
PDB file : Tito_2QF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QF4-query.scw
PDB file : Tito_Scwrl_2QF4.pdb: