Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LANEATQELFQVLDNTAIILQNELEISYLEAVYETGENLFQKEVLQKEELSSEKQLKLQESYESIELENFSNEEIRKGLQLALLKGMKHGIQVNHQMTPDSIGFIVAYLLEKVIQKKKNISILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVG----ADLQRQKMTLLHQDGLANLLVDPVDVVISDLPVGY------YP-------DDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPETLFKSEQARKSILILRKADVNVKPPKEVLLANLSSLTDPSVTAPILAEIENWFKSKQ |
2NP6 Chain:A ((22-185)) | -----------------------------------------------------------------------------------------------ETPPEVVDFMVS-----LAEAPRGGRVLEPACAHGPFLRAF---REAHGTA-YRFVGVEIDPKALDLPPWAEGILADF------LLWEPGEA------FDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFL--EKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREG------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94053 for 1099 contacts (-85.6/contact) +
2D Compatibility (PS) -15571 + (NN) -5472 + (LL) 15848
1D Compatibility (HY) -13600 + (ID) 2250
Total energy: -115098.0 ( -104.73 by residue)
QMean score : 0.405
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