Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQVTFKHNPVTLVGTERKVGDKAPNFTVVNRDLEEVTLHDYDGKVRLISVVPSIDTSVCSTQTRKFNEEASNLDNTVVLTISVDLPFAQKKWCAAEGLPNAITLSDHR-DLSFGEAYGVIMKEL---RLLARSVFVVNAVGEIVYTEVVPEGSDHPNYEAAIEAAKKA
4JE1 Chain:A ((9-175))
MSKVTLGGNPIDLAGTFPAVGAQAADFKLVGKDLADLSLASFAGKRKVLNIVPSLDTPTCATSTRKFNEAASSLDNTVVIVVSADLPFAATRFCTTEGLANVVTASTFRTGRAFANAYGVDVTSGPLNGLTARAVVVLDAQDKVIHAELVGEIKDEPNYDAALAALK--
General information:
TITO was launched using:
RESULT:
Template:
4JE1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81041 for 1286 contacts (-63.0/contact) +
2D Compatibility (PS) -17389 + (NN) -2630 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 3750
Total energy: -118602.0 ( -92.23 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_4JE1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JE1-query.scw
PDB file :
Tito_Scwrl_4JE1.pdb
: