Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAMNEQDEMLVMSGKEHREVLKRMLSYTKYHIPSLIWTGVLVLLVTLADVFAPILIKIFLDDYLTPMNLEMQALLILGAGYLGLTIGKSVVWYFQLLFFQKIALEIVQQMRIDIFTKLHSLGMRYFDKTPAGSIVSRVTNDTEAVKDMFINVLSTAIQSLFMLVGIYAAMFALNVQLALYSLLLFPLIVFIIFVYRKYSSQFYRARREKLSQLNAKIAESISGMSIVQQFNQERRLVK----EFEKINKDYYDVGMKNIKFNALLLGPAIDLIYALAVVIILSFFGAESLI-GPVAIGTIYAFISYFDRFLEAIYNVMERLAMYQEAITAASRVFRIMDETEEVPAQLNDPEAKITRAKIEFKDVSFAYEGGRDVLKNISFTAEPGQTVALVGHTGSGKSSIINLMMRFYEFERGDILIDGKSIKSHEITELRKKTGLVLQDSFMFYGDINTNIRLYDKSITDEQIVDAAKFVQADGFIQTLSDEYNHKVIERGASFSSGQRQLISFARTVVTNPQILVLDEATANIDTETESLIQTGLKRMREGRTTIAIAHRLSTIKDADLILVLSKGRIIERGTHDSLIAEEGVYHSMY-QLQNSGMDLDEAL |
4RY2 Chain:A ((180-727)) | -------------------------------------------LLYTALGIAGSFYIKFLFDDLIKFEKL--NDLHIISAGFAVIFLLQIFLNYYRSILVTKLGMSIDKSIMMEYYSHVLKLPMNFFNSRKVGEIISRFMDASKIRQAISGATLTIMIDTIMAVIG-GILLYIQNSSLFFISFIIILLYGIIVTVFNKPIQNANRQIMEDNAKLTSALVESVKGIETIKSFGAEEQTEKSTRDKIETVMKSSFKEGMLYINLSSL-----TGIVAGLGGIVIL-WAGAYNVIKGNMSGGQLLAFNALLAYFLTPVKNLIDLQPLIQTAVVASNRLGEILELATEKEL-----------GDIEFRNVDFRYGLRKPVLKNINLTIPKGKTVAIVGESGSGKTTLAKLLMNFYSPEKGDILINGHSIKNISLELIRKKIAFVSQDVFIFSGTVKENLCLGNENVDMDEIIKAAKMANAHDFIEKLPLKYDTFLNESGANLSEGQKQRLAIARALLKKPDILILDEATSNLDSITENHIKDAIYGLEDDVTVIIIAHRLSTIVNCDKIYLLKDGEIVESGSHTELIALKGCYFKMWKQTENT-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -305346 for 3793 contacts (-80.5/contact) +
2D Compatibility (PS) -56747 + (NN) -21238 + (LL) 5904
1D Compatibility (HY) -50400 + (ID) 8500
Total energy: -436327.0 ( -115.03 by residue)
QMean score : 0.363
|
|
|