Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREVASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERMEADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIEVNQGEELTEAEVAPVEEKATEETTEA
1N36 Chain:B ((7-240))
-----VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQ----------
General information:
TITO was launched using:
RESULT:
Template:
1N36.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72709 for 1930 contacts (-37.7/contact) +
2D Compatibility (PS) -25107 + (NN) -14528 + (LL) 1360
1D Compatibility (HY) -22400 + (ID) 6300
Total energy: -139684.0 ( -72.38 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_1N36.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N36-query.scw
PDB file :
Tito_Scwrl_1N36.pdb
: