Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MKKILIGGIRLYQKYISRFTPA--TCRFYPTCSAYGIEAIQT------------------HGALKGSYLAIRRISKCHPFHKGGLDFVPPKKDKNADSEHSCKVHHHH
2JN9 Chain:A ((1-105))
MVKTLRLNNVTLEMAAYQEESEPKRKIAFTLNVTSETYHDIAVLLYEKTFNVEVPERDLAFRGEMTNYSTSLTNLYEPGAVSEFYIEITEIDKNADSLEHH----HHHH
General information:
TITO was launched using:
RESULT:
Template:
2JN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31229 for 471 contacts (-66.3/contact) +
2D Compatibility (PS) -8737 + (NN) -2910 + (LL) 284
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -45942.0 ( -97.54 by residue)
QMean score : 0.331
(partial model without unconserved sides chains):
PDB file :
Tito_2JN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JN9-query.scw
PDB file :
Tito_Scwrl_2JN9.pdb
: