Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSNATLKEAVDVLKKTGVRITPQRHAILEFLINSHTHPTADDIYRALEGNFPNMSVATVYNNLRVFRDAGLIKELSYGDASSRFDFSTSNHY-HAICNVCGKIVDFHYPGLDEVEHFAAHMTGYEIDNHRLEVYGICPACKEKQSNN
2XIG Chain:A ((18-148))
--------------IKKNG--NSKQREEVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFISVLETSKSGRRYEIAAKEHHDHIICLHCGKIIEFADPEIENRQNEVVKKYQAKLISHDMKMFVWCKECQES----
General information:
TITO was launched using:
RESULT:
Template:
2XIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69632 for 797 contacts (-87.4/contact) +
2D Compatibility (PS) -13833 + (NN) -3333 + (LL) 1652
1D Compatibility (HY) -8400 + (ID) 1600
Total energy: -95146.0 ( -119.38 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_2XIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XIG-query.scw
PDB file :
Tito_Scwrl_2XIG.pdb
: