Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKMKRLTWDETKITAFQEALVSWYEA-NKRVLPWRENTEPYRIWVSEIMLQQTKVDTVIPYFNRFMTQFPTMESFVNADEADILKAWEGLGYYSRVRNLQTAMKQVMADFSGEVPTDLTTILSLKGVGPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEIGEDIMKASTRKIFEEVLYQLIDKKNPAA----FNQGLMEIGALVCTPTKPMCMLCPLQPFCEAHKNGVETNYPVKIKKVKMKTKELLSIIVISEDGKIAIEKRPENGLLANMWQFPTIEISKKENDEVAKLQFLHNYGLEVLLEDEPIAHIKHVFSHLVWKMDIRVAKLQSAIPNENWYFATEEEMKRLAFPVPYQKMWQAWKDFKGE |
| 1KG6 Chain:A ((2-224)) | ------------QASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVRRVLARCYAVS----GWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWALYPGKKP----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137813 for 1698 contacts (-81.2/contact) +
2D Compatibility (PS) -22757 + (NN) -8110 + (LL) 13012
1D Compatibility (HY) -18400 + (ID) 4750
Total energy: -178818.0 ( -105.31 by residue)
QMean score : 0.557
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