Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFAVIQFPGSNCDLDMLHAIRDSLGEEAEYIWHAETSLAGFDAVLLPGGFSYGDYLRTGAIAKFSSIMPEVLRFAEMGKPVLGVCNGFQILTE-----IGLLPGALIRNNNLHFICKTVPLRVANASTMFTELYEEGEIIQVPVAHGEGNYYCDDETLLKLKENNQIVFTYDSVNPNGSRADIAGIVNERGNVLGMMPHPERAVEEIIGGTDGLRLFESVVKAWKEEQVNA |
1GPW Chain:B ((43-196)) | -----------------------------------------YDLLFIPGVGHFGEGMRR---LRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLSLIEGNVVKLRSRRLPHMGWN-EVIFKDTFPNGYYYFVHTYRA----VCEEEHVLGTTEYDGEIF------PSAVR---------KGRILGFQFHPEKS------SKIGRKLLEKVIEC-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58164 for 1160 contacts (-50.1/contact) +
2D Compatibility (PS) -15482 + (NN) 274 + (LL) 5524
1D Compatibility (HY) -9200 + (ID) 2050
Total energy: -79098.0 ( -68.19 by residue)
QMean score : 0.249
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