Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMAKAVTPEPRLGNPTPRVAETASGMLNAIGLQNPGLEHVLAHELPFLEQ--FETPIIANVAGATEDDYVQVCARIGESKAVKAIELNISCPNVKHGGIAFGTDPEVAHRLTKAVKNVASVPVYVKLSPNVADIVSIAQAIEAAGADGLTMINTL----LGMRIDLKTRKPII--ANGTGGLSGPAIKPVAIRMIH--QVRAVSNIPIIGMGGVQTVDDVLEFLIAGADAVAVGT-MNFTDPFICPKLISELPKRMDALGISSLQDLKKERTNQ |
| 1JRC Chain:A ((13-304)) | --------------NPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSIASMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVP-GKPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYF-DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQKGYQSIADF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166132 for 2360 contacts (-70.4/contact) +
2D Compatibility (PS) -30404 + (NN) -15440 + (LL) 1736
1D Compatibility (HY) -14400 + (ID) 4700
Total energy: -229340.0 ( -97.18 by residue)
QMean score : 0.465
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