Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDVFLKALPVLQKLTTAGFEAYFVGGSVRDYLLNRTISDVDIATSAFPEEVKEIFQSTYDTGI----AHGTVTVRENNEFYEVTTFRTEGTYEDFRRPSEVKFIR--SLEEDLQRRDFTMNAIA----MDEHFALHDPFSGQEAIKNKAIKAVGKASERFHEDALRMMRGVRFLSQLDFQLDSETEKALESQI--GLLQHTSVERITVEWLKMIKGPAIRRAMDLLLKVEMETYLPGLKGEKKALTEFGSWDWGKRTTDDAIWLGLVVTVQPNNVNAFLKAWKLPNKTIQLVSKAYQYALKMKETWLAEELYHAGKAVFSLVNELNIIRGKENNQHKLSQAYEALPIHSKKDLAITGADLLKWSGESAGPWVKETLDKLECGVLCNEINNEKNQIKRWLGYHEE |
| 4WC2 Chain:A ((10-199)) | ------------------GLRAYIVGGVVRDILLGKEVWDVDFVVEGNAIELAKELARRHGVNVHPFPEFGTAHLKIGKLKLEFATARRE-T-------------EPASLKEDLIRRDFTINAMAISVNLEDYGTLIDYFGGLRDLKDKVIRVLHPVS--FIEDPVRILRALRFAGRLNFKLSRSTEKLLKQAVNLGLLKEAPRGRLINE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47330 for 1175 contacts (-40.3/contact) +
2D Compatibility (PS) -17613 + (NN) -3588 + (LL) 17260
1D Compatibility (HY) -12800 + (ID) 3100
Total energy: -67171.0 ( -57.17 by residue)
QMean score : 0.458
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