Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQKKVAILGAGSWGTGLALVLADNN------HKPVI--WG-----NLDKIVNEINESHTNSHYLPDIILPTEVKATLSLDEAIDGAEIVVIAIPTNAMRIVCKQLNEALKEPTILVHVSKGIE--PETNLRMSEVIEEEIDAAKRKALVVLSGPSHAEEVALRH----------PTTLCASCKDLSAAEIVQDRFINNNLRIYTNDDVIGAEIGGALKNIIALGAGISDGLGYGDNAKAALMTRGMAEITRLGVAVG--SNPQTFYGLT-GIGDLIVTCTSVHSRNWRAGNMLG-KGENLDEVLEKM--GMVVEGVRTAKAVHGWAKKLDI--DMPITESIYAILFENKDAREAVDLLMGREKKIEKESF |
| 4FGW Chain:A ((36-383)) | ----KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGIQ----CGALSGANIATEVAQEHWSETTVAYHIPKDFRGEGKDVDH-KVLKALFHRPYFHVSVIEDVAGISICGALKNVVALGCGFVEGLGWGNNASAAIQRVGLGEIIRFGQMFFPESREETYYQESAGVADLITTCAG--GRNVKVARLMATSGKDAWECEKELLNGQSAQGLITCKEVHEWLETCGSVEDFPLFEAVYQIVYNNYPMKNLPDMI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211071 for 2636 contacts (-80.1/contact) +
2D Compatibility (PS) -33663 + (NN) -9907 + (LL) 2144
1D Compatibility (HY) -22400 + (ID) 5300
Total energy: -280197.0 ( -106.30 by residue)
QMean score : 0.493
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