Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VVKTRKEKREYEEPADYDMSSEGQDEFNNEPPMLSRSDSRRGKKKTIFRYPLLNLLIVFFLLIPIVIVIVFVTVQNMGSSNEVKTETESTVNVSDNTQSKEEKEKAKKAAEEKAAAEKAAEEKKAAAEKAEADKKKQEEDAVKAANAKKEQEAAEEKAAADKAAAEKAAAEKAEQQKANEASQQKAGGSHTVKAGDTLYSIARSTYGQAGAAAGVEKIKQANGLGSDNVPVGTVLTIPQ |
4UZ3 Chain:B ((52-96)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THVVAPGDTLFSLARR-YGTT-----VEALMRLNGLSSPEIKVGQVLRLPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10310 for 266 contacts (-38.8/contact) +
2D Compatibility (PS) -5255 + (NN) -4209 + (LL) 15036
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -11038.0 ( -41.50 by residue)
QMean score : 0.589
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