Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTFERLGTMNVNAEGHLEIGGVDTLKLADKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSGGELFTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID-NYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYIL-TGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRPALYDA-HYDAVLAANPEKVAE----ETVAIAGKCCESGDML-------IWDLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLSL |
| 1KO0 Chain:A ((16-410)) | ----------------------NLLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FDV------VRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQ-THPDDIVFTADVIDQATLERVSELQIPVNAGSVDML-DQLGQVSPGHRVWLRVNPGF-GHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHH----LQLVGIHMHIGSGV-DYAHLEQVCGAMVRQVIEF----GQDLQAISAGGGLSVPYQQGEEAVD-TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQM-GSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETV-VAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQT----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KO0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191881 for 3258 contacts (-58.9/contact) +
2D Compatibility (PS) -40893 + (NN) -14815 + (LL) 3604
1D Compatibility (HY) -21600 + (ID) 6550
Total energy: -272135.0 ( -83.53 by residue)
QMean score : 0.456
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