Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYFDHAATTKMSEAALEVFMS-ASREFFANSESLHDAGTKSAALLEKCRGSFAEILHV--PSR--GIMFTSGGTESNQIAIQTLLHSTKKKEVLVSPLEHASVWQQLEALEEAGACWLRLLPVDAFGRVDPAVLSDMISPDT---GLVIIQHVNSEIGSIQPIRELAHIAKQAGVYFHTDIVQSFGKL-----DLTLDDVTSFSISSHKIYGPKGAGLLFIKPDVPMQVPLPNVHHEFGFRPGTVNVPAIAAFTTAAYDIMGNREKEARRIAELKKAICEALTAKVK-------VEGGLNTSPFILGITLPNMQGQEALLALNEADIQISTTSACSLRDPAPSRTLLATGKTIEEASRFIRLSFGRENELSDSLIFKKELDKLLRKR |
| 4IXO Chain:A ((9-363)) | MIYLDHNATTFIDPRVKEFIISLMDKEL--NPSSAHSSGRFAKNLIETVRAQIATALGITLSSREYDITFTSSGTEGNNLIMKNFYDG----DIFISAIEHLSIYNHINY-----APNIKVISVNTQGLVDLEHLEELLAQSNTSKKLVSIIMANNESGVLQDIAEIGKITKKYEAKFHSDLVQGFGRIPINIKALGLDFAT---ISGHKIGGGQGGAALISSSNFQITPMIIGGGQEKSVRSGTENVLAIAGFGLASALRTDNISENYIKIKKLQ----ENLEKKLKKYPNVNIVSNNVARLPNTTLITIPNTDAQAKLIGFDLHNICVSSG----------SHVLTNMGVGEEEAKSSIRISLSHTNTVRD--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159147 for 2802 contacts (-56.8/contact) +
2D Compatibility (PS) -35989 + (NN) -19457 + (LL) 3124
1D Compatibility (HY) -19200 + (ID) 5450
Total energy: -236119.0 ( -84.27 by residue)
QMean score : 0.473
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