Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEEYQKAVQSLYAIAYTIKMSKMGETRLNGYADFVVPPLEGFWWSEEKFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVAQKKKPDVDTSRVKLVRFEEGECVQMMHIGPFSE--EVKTVAELHQFMETEGLHND------TG-A--VRKHHEIYLS-D-PRKADPEKMKTILRLPVS |
3B49 Chain:A ((23-110)) | ------------------------------------------------------------------------------------------------------------------------------------RKPERIFVPEMNFLMVDGKGDPDGEEYQKAVQSLYAIAYTIKMSKMGETRLDGYSDFVVPPLEGFWWSEGKFDLKDRDAWLWTSILRQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B49.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8342 for 388 contacts (-21.5/contact) +
2D Compatibility (PS) -8150 + (NN) -4612 + (LL) 9360
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -14244.0 ( -36.71 by residue)
QMean score : 0.417
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