Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYTITLNPAIDRL-----LFIQGELEKRKTNRVKKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGSTMIPEAGFTVSQTNKVNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEYLNLAVEMG-VDFIKPNEDEVIAILDEKTNSLEENVRKLAEKI------PYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITETLK--VATGCSASKVMQQDSSSFDLEAAGKLKNQVSIIQLEER |
| 3UMP Chain:A ((4-287)) | -IYTLTLAPSLDSATITPQIYPEGKL------RCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPV-ATVEAKDWTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQLEEQVLE-IESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQ-PDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAAT------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UMP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158861 for 2280 contacts (-69.7/contact) +
2D Compatibility (PS) -28932 + (NN) -9466 + (LL) 3192
1D Compatibility (HY) -15200 + (ID) 4100
Total energy: -213367.0 ( -93.58 by residue)
QMean score : 0.460
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