Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSIEIKSPEEFQAHI-NGEELVYVDYWKDNCPNCKMLDLSFAEFKNSEIASKVKVLKVKLEEMGENFFFDRDVQQTPTLVLYKGGEEIHRLNGFIPPNKIEEAVSLNA
3PIN Chain:A ((4-103))
----QLKSASEYDSALASGDKLVVVDFFATWCGPSKMIAPMIEKF--AEQYSDAAFYKLDVDEV-SDVAQKAEVSSMPTLIFYKGGKEVTRVVG-ANPAAIKQAIASN-
General information:
TITO was launched using:
RESULT:
Template:
3PIN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41548 for 730 contacts (-56.9/contact) +
2D Compatibility (PS) -10532 + (NN) -2679 + (LL) 524
1D Compatibility (HY) -8400 + (ID) 1550
Total energy: -64185.0 ( -87.92 by residue)
QMean score : 0.672
(partial model without unconserved sides chains):
PDB file :
Tito_3PIN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PIN-query.scw
PDB file :
Tito_Scwrl_3PIN.pdb
: