Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDGSVVIEISLDDKKADKQLDAFEKDLAKAGTNAGAALDKAYREAVSDIASQSKRLKDTFVNAFKSMGNAGSNALKASLNFIRELPSNVQAALSKLASTVKTGFVNAAKASITAVKNLGTSIKNTAVNIKNGFFSIAKTVQSSIVSAVKISINVIKSIPGAIKSAGISIKSALVSSLQAAKSAAISFAQTTVKVIKSIPGAAKTAATAVKNSFVVAYKAVVVAAYMSVKGTISAVKAIPSATKSAALAVSSAMKTAFSAVASAAKTTGTTVKSALKTGFSAVKSGAKAAGQAGISALKGLGNIAKSTGSLIKSGLVSGFNAAKAAAKGAGAGMREALKNSVEKPAEQARFSILRLAAAFGLIAATKNVVGSAIGRVDTIDTATKSLTVLTGSAKDAQLVMTDLTAAIDGTPIALDAVALGAKKMVAAGMKAANVKPVFTAIADAAYGVGNGSESIDQMTDAISALQASGVAYADDINRLVDAGVPAWQILANSTGKSVGEMKKYVSEGSLESTRAIAMLTKGIEEGTTGMAGNTAKMAGLAKTAGNTISGSFANMKTAAVKSLANIVENLKGPIIQALDVAKNAFKQFAAVTASPEFQKKLSDLIQKIKEFIPVLIEWAPLLAKVAAGFVAFNIISSVFSKVAKLAGAIKSLTSSGSLLSVVANTIKGSFVKLVGTLGSTTAAFGVVVAAVGAVIAVIYGMYTAFKENTAGIKSFLSGMWEAVKNSFGKIIDVFKQIVSALKPVGSGFKGILKYIGVRAWVVLGFALAAVVDVIQVLARIVLVAIKALQGLYYAIKAAFQVLQGDLKGAKKSLEQSKDAFVDAGSAIKDAFNKDNYALTGTVEAFKQMGGEAEKTAKKTETSGK-----KIKDT-LKLVESTAKQTETTVSKSNQAIDTMLSGG-------VDQYG----NKLSEKTKSFLNSAKELYSQYQESAKKSQDAYTAAMEKAQSLEGDKRKKAIADANKTLVDETTKNNSTLLTLQSDYSNMLKTNRWADGQELTAQQKKFLQQQTTDIQTELAKQNQLYVEANLLRLEQGKSLNEKERNTSLEVQKSLYEEKKKAVETGEKSLADLKKKKADASTETEKANYQIQIDEQTKKNQTLSTNLKNWASEMNSIIANGGTLNAQTFANGLSQLGNISDEQLSALWQNFVSTSTSIDNTLAGLAGIMGQRGGEGVQAFVTALQSGDYTTAALNINNDVLSTISSLPNGMFLNGESGKNQFLTAIKSGDFQGAGKYLVDGVKMGTDSIDSEMKTKGQTGGQNFADGVKGKEGAAKSAGSAVKNKAKEGATDPNAFKAVGSKDSAGFNNGVMGGKGGAYSAGSSVGNSAKSGAGSVDSSGVGSDFASGYVNGILSGMGAVGRAAASLANKALAAVQKKQDSHSPSKESKKLGGDFGTGYSLGIADKNKAVTKAANNLVASALGTESQIKKLSSTLKDKISSAIDAGLHSKNKSSGQLKQAKALNSIEGYIVQQTNRLAATAKKRDKVVAQLKAANTKMADLTKQSKEYAASITEKMQSYGSISNVDPENPKSIQAEMQKRLKEIKAFQANVEKLRKKGVSKDIINDILESGVENGSSYAQALAKSDAKTIKAINSTQNQINSASKAMGNTAANAMYSAGINAAKGLINGLNSQKKQLEKAAKSIANTITNSVKKALKIHSPSRVAIELGKFFTGGLGNGVLAGAKGAVQSTNKMVDKVVNAASNMTVPTINLPKISAEKALGLKSVDLNRTITVKTIIDNKTKESSNADLIKAIQQSGDRPIIFNVDGKDIADNTNNHLGSSTSLAFYGKGL |
| 4IM3 Chain:A ((456-655)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKDDYNETVHKKTEVVITLDFCIRNIEKTVKV------AAELGEISDIHTKLLRLSSSQG--TIETSLQDIDSRLSPGGSLADAWAHQEGTHPKDRNVEKLQVLLNCMTEIYYQFKKDKAERRLAYNE--EQIHKFDKQKLYYHATKAMTHFTDECVKKYEAFLN---------KSEEWIRKMLHLRKQLLSLTNQCFDIEEEVSKYQE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 46896 for 947 contacts (49.5/contact) +
2D Compatibility (PS) -18680 + (NN) -7609 + (LL) 103736
1D Compatibility (HY) -5600 + (ID) 2500
Total energy: 116243.0 ( 122.75 by residue)
QMean score : 0.374
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