Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFILEVGSLADWVSGLATVGALFWAIKLNSNENRKRLTILFRHSFVSKKNGIIISDGKPKVFIITPVNNSKFSLEINFRQILLVPSLMDRLLFRAEPKKLSNIEALLKQLENKANWQI--IKPNLSGEPIMFDYEFIVKQIKKYADGKRFNFAIEIQFIDSTSKIFKHKEKLELRKIKGL |
1LKX Chain:A ((568-619)) | -----------------------------------------------------------------------------------------------------NAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRY------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 212 for 156 contacts (1.4/contact) +
2D Compatibility (PS) -4622 + (NN) -3755 + (LL) 10776
1D Compatibility (HY) -1600 + (ID) 400
Total energy: 611.0 ( 3.92 by residue)
QMean score : 0.477
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