Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEKQSALESKARSWLIERGVEIDDIAELVLFLQQKYHPGLELEICRQNVEHVLRKREVQNAVLTGIQLDVMAEKGELVQPLQNIISADEGLYGVDEILALSIVNVYGSIGFTNYGYIDKVKPGILAKLNEHDGIAVHTFLDDIVGAIAAAAASRLAHSYHDDIVN
4IVJ Chain:A ((71-155))
---------------------------------------GYDYDTFAADLNTVLETLDLQDAVLVGFSMGT----GEVAR----------------------YVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKA----------------
General information:
TITO was launched using:
RESULT:
Template:
4IVJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35945 for 495 contacts (-72.6/contact) +
2D Compatibility (PS) -8780 + (NN) -1378 + (LL) 6960
1D Compatibility (HY) -7600 + (ID) 1200
Total energy: -47943.0 ( -96.85 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_4IVJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IVJ-query.scw
PDB file :
Tito_Scwrl_4IVJ.pdb
: