Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSILIADDDKEIVDLVKLYLQNEGYTIYQAYDGAEVWRLVQEKQPTLVILDIMMPEMNGLEVCRLMRDNGILTPILMLSAKAEDNDKIMGLLTGADDYMVKPFNPLELSVRVKAILRRMQQMSQAEPVSQDKVIIGPIVVDRGLHVVTVGGKELHLTTSEFDILFLLASEPGRVFSSEYIFEKIWQEKALGASKTVMVHISNLRDKLREAMGGENVIKTIWGVGYKIEI
1NXV Chain:A ((4-119))
----ILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSV-PILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRS--------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NXV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94518 for 917 contacts (-103.1/contact) +
2D Compatibility (PS) -12399 + (NN) -8801 + (LL) 8952
1D Compatibility (HY) -11200 + (ID) 2850
Total energy: -120816.0 ( -131.75 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_1NXV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NXV-query.scw
PDB file :
Tito_Scwrl_1NXV.pdb
: