Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDLINIQKKLLPDVLMIMQKRYQILRSIYFSEPVGRRTLAGMLGMSERVLRGEVEFLKAQGLVEIASSGMTVTKEGLVVFRDLESVMNQLSGLHSMEEQLAKKLQIKKCLVVQGDSDDTPWVREEMGRVAVEQLDMALTEKRNIVAV-MGGSTMATVAEMMTTDFAKGRELLFVPGRGGIGEDLDN--QANTICDKMATKTNTKHRVLYVPEQL---GEEAYRSLLKEPAIQEGLRLVQSANAIILGIG-----DALAMAKRRHTGEDVLEKIIHRKAVGEAFGYYFDEQGEVVHKVPT----FGLQFEDLAQIPHIIAVAGGTSKAKAIKSYMKSAPKNTILITDEGAAKSLLKGSNTLLK |
| 4L51 Chain:A ((18-265)) | -------------------------------------------------------------------------------------------EGCLEYETQLRRQFSLQHVRVIPGL---DVGGRLGIG---AAHMLMSLLQPQQMLAIGFGEATMNTLQRL--SGFISSQQIRLVTLSGGVGSYMTGIGQLNAACS-----------VNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINA-LVTDQDTAAAILR------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L51.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104417 for 1957 contacts (-53.4/contact) +
2D Compatibility (PS) -25001 + (NN) -12420 + (LL) 9816
1D Compatibility (HY) -16400 + (ID) 3450
Total energy: -151872.0 ( -77.60 by residue)
QMean score : 0.457
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