Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKLVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGRKAKSFMDNGDLVPDEVTNGIVRERLSEDDAKDGFLLDGFPRTVEQAQELENILSDLGTELDAVINIDVEKDVLMKRLTGRWICRTCGKTYHEIYNPPKVPGKCDLDGGELYQRDDDKKETVEKRLNVNMKQTKPLLDFYSEKGKLHNINGEQEIKDVFVDVEKILASF
2OO7 Chain:A ((1-215))
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQIQPLLDFYSEKGYLANVNGQRDIQDVYADVKDLLGGL
General information:
TITO was launched using:
RESULT:
Template:
2OO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59912 for 1678 contacts (-35.7/contact) +
2D Compatibility (PS) -23563 + (NN) -15428 + (LL) 0
1D Compatibility (HY) -25200 + (ID) 7350
Total energy: -131453.0 ( -78.34 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_2OO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OO7-query.scw
PDB file :
Tito_Scwrl_2OO7.pdb
: