Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VITKIDKNKVRKKRHARVRSKISGTESRPRLNVFRSNKNIYAQIIDDVNGVTLASASNLDKDFGSAESKVDAASKVGELVAKRASEKGITSVTFDRGGYLYHGRVKALAEAARENGLEF
4IO9 Chain:L ((26-111))
---------------------------RLRLSVYRSSKHIYAQIIDDSRGQTLAAASSAALKSGN---KTDTAAAVGKALAAAAAEKGIKQVVFDRGSYKYHGRVKALADAAREGG---
General information:
TITO was launched using:
RESULT:
Template:
4IO9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4850 for 607 contacts (-8.0/contact) +
2D Compatibility (PS) -9521 + (NN) -5065 + (LL) 2588
1D Compatibility (HY) -4000 + (ID) 2650
Total energy: -23498.0 ( -38.71 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_4IO9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IO9-query.scw
PDB file :
Tito_Scwrl_4IO9.pdb
: