Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDINMFILYFFIYSVLGWAWEEVFCSISEKKLVYRGFLYGPYCPIYGFGVTAVLMMILPFQNNLWALFIFSMIICTVIEYVTATILEALFHTTWWDYHNWPLNVKGRICLPISIFWGFACIIVVRFLHPLVTEFADWILSWGGWIIPALIVVLMLIDTIKSVTSMLSFQKALAEFNEKLNAQANELKASVKERAKEFEEGLL----KKQENVDMKIAEIEAKRKQDKELAASMRKLKFNERRMLKSFPKMKVKRAAPFKNLNKSLLRVDKLKRK |
2KKW Chain:A ((1-61)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKE------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8315 for 210 contacts (39.6/contact) +
2D Compatibility (PS) -6487 + (NN) -6936 + (LL) 19644
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 11536.0 ( 54.93 by residue)
QMean score : 0.637
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