Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFNFFVRSGFIGLILLFVIQVLGIIRGLLIQSGFMDGSIDQTLLGTKLIIVPIIFFTISVIFFLLWFYKDYQKSRFPN
1JB0 Chain:I ((22-37))
-------------------------------------------------------MPTVVMGLLFLYIEGE--------
General information:
TITO was launched using:
RESULT:
Template:
1JB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6333 for 54 contacts (-117.3/contact) +
2D Compatibility (PS) -1627 + (NN) -605 + (LL) 5052
1D Compatibility (HY) -2400 + (ID) 100
Total energy: -6013.0 ( -111.35 by residue)
QMean score : 0.871
(partial model without unconserved sides chains):
PDB file :
Tito_1JB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JB0-query.scw
PDB file :
Tito_Scwrl_1JB0.pdb
: