Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTTETETIKPQLAELKANLTKRNLQYVMEVEKHLRETHYGEEQQEIIVYEMSEKILAEQKKGITARKLFNLTPTEYVVSLDVKAATVEQNTDKWWLVLDGGLLVLGAMMLISGISAYFQKNAQTLGIIVLLITAVVGGFAMLILRKYASNMRAGQKGGTIKYLLVAVGVIAVWMFVMTIVQVTIPPNINVALSPIVNTVGGAIIIALRFYVKKKKNIPSL |
1B8Z Chain:A ((15-66)) | -------------------------------------GAKKKDVKLILDTILETITEALAKGEKVQ---------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B8Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 627 for 115 contacts (5.5/contact) +
2D Compatibility (PS) -3495 + (NN) -2543 + (LL) 17268
1D Compatibility (HY) -400 + (ID) 250
Total energy: 11207.0 ( 97.45 by residue)
QMean score : 0.368
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