Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LKTTKIVIASLVSLTMVSNPLLTFAATNDVIDNTTEITTDKETSSTQPTIKNTLKAGQTQSFNDWFPDDNFASEVAAAFE-MQATDTISEEQLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITTLD-LSQNTNLTYLACDSNKLTNL--------------------DVTPLTKLTY---LNCDTNK-LTKLD-VSQNPLLTYLNCARNTLTEI-DVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLD---CSFNKITEL-DVSQNKLLNRLNCDTNNITKLDLNQNI-QLTFLDCSSNKLTEID-VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTELDVSHNTKLKSLSCVNAHIQDFSSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDQATNTITWENLSTDNPAVTYTFTSENGAIVGTVTTPFEAPQPIKGEDVTVHYLDDKGEKLADDEVLSGNLDDPYTSSAKDIPDYTLTTTPDNATGTFTTTSQSVTYVYTKNIVAAEPVTVNYVDDTGKTLSPSEILNGNVGDTYNATAKQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNPAPEKGVVEIHYVDEDNKQLNSTTEISGTIGDNYTTEPKTIEGYTLTTTPGNATGTFTTGSQTVTYVYTKNIEAAEPITVNYVDANGKTLAPSETLNGNVGDTYKATAKQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNTNTDQPLPTKKPTNTTPTKPSNLKTTEVKKASDTLPKTGDSAPWKSALLGVFLSSTALVIWKKKK |
4FMZ Chain:A ((12-292)) | -------------------------------------------------------------INQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQ---IEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQIS--DISVLNNLSQLNSL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4FMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -134411 for 1806 contacts (-74.4/contact) +
2D Compatibility (PS) -25069 + (NN) 394 + (LL) 30016
1D Compatibility (HY) -26000 + (ID) 4050
Total energy: -159120.0 ( -88.11 by residue)
QMean score : 0.458
|
|
|