Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVFNIQTFNAIAKEGLKTFDLEKYVIDANQPADGILLRSYNLHDFDFPETVKAVARAGAGVNNIPVENCSEKGIVVFNTPGANANAVKELVLASLFVSARPILEGTEWVKELPAEDDVEQKVEAGKKAFAGTELAGKKLGIIGLGAIGALVANDALSLGMDVVGYDPFVSVDTAWRISKEVERAMTIEEVLATCDYLTVHVPLTDKTRGMFNADTLQLVKDNAVLLNFSRGELVDSASVKEALDDGLLRLYITD------------FATKELLNHKKVHVFPHLGASTEEAETNCAKMAAKELQSYLETGSIKNSVNFPNVEMPYN-GHPRIGICHKNIPNMVGQITTELGKYSLNILDMINRSKNEYAYTLIDIDKETQANLEQLKQDLLAVQGVLRVRVIEPLGVTV
3K5P Chain:A ((83-415))---------------------------------------------------AVGCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRI-----FPRSVSAHAGGWEKTAIGSR-----EVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQYG-----NVKPAASLDELLKTSDVVSLHVP-----SKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTP-LQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYSDVGSTVGAVNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEADGVGEAS-DAVLQEIREIPGTIRARLL-------


General information:
TITO was launched using:
RESULT:

Template: 3K5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165390 for 2549 contacts (-64.9/contact) +
2D Compatibility (PS) -34222 + (NN) -10469 + (LL) 5460
1D Compatibility (HY) -17200 + (ID) 4900
Total energy: -226721.0 ( -88.95 by residue)
QMean score : 0.562

(partial model without unconserved sides chains):
PDB file : Tito_3K5P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3K5P-query.scw
PDB file : Tito_Scwrl_3K5P.pdb: