Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQVGSLVEMKKPHACVIKETGKKANQWKVLRVGADIKIQCTNCQHVIMMSRYDFERKLKKVLQP
3IRB Chain:A ((33-62))
-----------------------GEQFFNGLKQNKIIGSKCSKCGRIFVPARSYCEHCFVKIENY
General information:
TITO was launched using:
RESULT:
Template:
3IRB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1480 for 150 contacts (-9.9/contact) +
2D Compatibility (PS) -3082 + (NN) 681 + (LL) 1832
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -3499.0 ( -23.33 by residue)
QMean score : -0.086
(partial model without unconserved sides chains):
PDB file :
Tito_3IRB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IRB-query.scw
PDB file :
Tito_Scwrl_3IRB.pdb
: