Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMNKKVLLTSTMAASLLSVASVQAQETDTTWTARTVSEVKADLVKQDNKSSYTVKYGDTLSVISEAMSIDMNVLAKINNIADINLIYPETTLTVTYDQKSHTATSMKIETPATNAAGQTTATVDLKTNQVSVADQKVSLNTISEGMTPEAATTIVSPMKTYSSAPALKSKEVLAQEQAVSQAAANEQVSPAPVKSITSEVPAAKEEVKPTQTSVSQSTTVSPASVAAETPAPVAKVAPVRTVAAPRVASVKVVTPKVETGASPEHVSAPAVPVTTTSPATDSKLQATEVKSVPVAQKAPTATPVAQPASTTNAVAAHPENAGLQPHVAAYKEKVASTYGVNEFSTYRAGDPGDHGKGLAVDFIVGTNQALGNKVAQYSTQNMAANNISYVIWQQKFYSNTNSIYGPANTWNAMPDRGGVTANHYDHVHVSFNK |
| 3MC9 Chain:A ((217-299)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEPRVLVSEVLVRP---QSGQLTPELE-TQVYNVIRTQP---GRTTTRSQLQEDINAIFGTGFFSNVQA-SPEDTPLGVRVSFIVQPNPVL--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MC9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1844 for 548 contacts (3.4/contact) +
2D Compatibility (PS) -8232 + (NN) 1987 + (LL) 23736
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: 14585.0 ( 26.61 by residue)
QMean score : 0.276
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