Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKANQLIAAIFDVNNTFMQGCNVVFDLALLNLLFMITCLPLVTIGAAKISLYRTLWQKLEGDQTNLLILYIKHLKKEWFQGMLLGLVELSILVVIIFDLTILHYQIGFIVSFLKITCYAFLLLTVMTSIYLFPMAARYEMSLLDTVKKSFIMACLNLKWTGVLMFLLIMTWFIMVQSSLLFMLTVSAIFIFAYTAFAYFKIIILQKQFAYFSKQQGDYQ
2HO9 Chain:A ((1-167))
MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIA-NTPAFIKGVTNLRGVIVPIVDLRIKFS-------QVDVDYNDNTVVIV-LNLGQRVVGIVVD------------GVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALG------------------DRMLILVN--------------IEKLLNSEEMALLDSAASEVA
General information:
TITO was launched using:
RESULT:
Template:
2HO9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -198319 for 1293 contacts (-153.4/contact) +
2D Compatibility (PS) -16433 + (NN) 12334 + (LL) 6784
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -201234.0 ( -155.63 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_2HO9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HO9-query.scw
PDB file :
Tito_Scwrl_2HO9.pdb
: