Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIKWFSLVRITGLLLVLLYHFFKNSFPGGFVGVDIFFTFSGFLITALLIDEFSKTKKIDFVSFCRRRFYRIFPPLVLMVLVTIPFVFLVKSDFRASIGSQIMTALGFTSNFYEILTGGNYESQFIPHLFVHTWSLSIEVHFYVLWGLTVWLLSKRSKDQKQLRGTLFLISMGVFGVSFLTMFVRAFFVDNFSTIYFSTLSHIFPFFLGAMVATISGIREITGRFKKNIKNLTLKHNLIMMGSAFAGLMILTFALDFDNRLTYLFGFVLSSIFASVMIYNARILHEHTPDISEPFVITYLADISYGMYLFHWPFYIIFSRLSPNWIAVILTVVLSAVFSTLSFYIIEPFILGRKPKFLDYEFDLLPYKKWLFSIGGVLTLITVVTMLTAPSIGSFETELLQNSLQQARTNTNRTHTLAAGDAGALSDVTVIGDSVALRSSAAFNKLLP-EVQL--DAAVSRNFSKSFDIFENRIQNKALSKIVVLAVGVNSLDN------YKTDLSQFIKSLP---KGHRLIIVTPYNAKN------------MSQVTTVRDYELSLMKKYNYITVADWYKVATEH----PEIWGNTDGVHYSDSDTTGADLYVSNVKKAIQKSAQRAAK |
| 2HSJ Chain:A ((31-213)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVVEPNILFIGDSIVEYYP--LQELFGTSKTIVNRGIRGYQTGLLLENLDAHLYG-GAVDKIFLLIGTNDIGKDVPVNEALNNLEAIIQSVARDYPLTEIKLLSILPVNEREEYQQAVYIRSNEKIQNWNQAYQELASAYMQVEFVPVFDCLTDQAGQLKKE-YTTDGLHLSI-A--GYQALSKSLKDYLY-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79509 for 1185 contacts (-67.1/contact) +
2D Compatibility (PS) -16404 + (NN) -660 + (LL) 36448
1D Compatibility (HY) -7600 + (ID) 1050
Total energy: -68775.0 ( -58.04 by residue)
QMean score : 0.518
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