Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYSKEIIQLAIPAMIENILQMLMGVVDNYLVA-QLGVVAVSGVSVANNIITVYQAIFIALGASIASLLAKSLAGSEKDDAISVCSQAIFLTLLIGAVLGIIS--IVFGQTFFKLLGTTKSVAQVGGLYLAIVGGGVVTLGMLTTLGSFLRVQGQPRLPMYVSIFVNFLNAVLSGFAIFEWRYGLVGVAVSTLIARLIGICILAKYLPIKKIIKRMTW-------KISAQIWNLALPS----AGERLMMRAGDVVIVAIVVQLGTNVVAG-NAIGETLTQFNYMPGLGIATATIILTAKYVGQKNRESIEETIQSSYYIGLVLMILISSFMLLAGKPLTQLFTNNPSAIKGSLIVILLSFVGVPATIGT-LVYTAAWQGLGNAKLPFYTTTIGMWLIRVVLGYLLGIVFELGLLGVWMA-TIADNIFRWLFLKVHYHRYIQKM |
| 4LZ6 Chain:A ((15-425)) | ----KLLRSLSIPAMIGMFVMALYNVVDTIFISYAVGIEGVAGVTIAFPIMMIMMSMAGALGIGGASVISRRLGERRGEEANQVFGN-ILTVILVLSVIGFISAFTLLGPA-LQLFGATSVTQGYATDYLFPILLGSIFFFFAFAANNIIRSEGNATFAMVTMIVPAVLNILLDVLFIFGLNMGVLGASIATVIAQASVTGLVLRYFLTGKSTLSLHWSDLRMKGSVIKEVCLVGLPAFVQQSSASLMM----IAINSMLLRFGSDFYVGVFGLVQRIMMFVMMPMMGIMQAMQPIVGYNYGAKQYSRLRETVMLGFKVATIFSIGIFALLMLFPEALLRVFTADREVIQAGVSAMHILFC-VTFLIGAQIVAGGLYQSLGKPKQALILSLSRQIIFLIPLVLILPHIF--GLSGVWWAFPIADVLSFILTVVLLYRDRNVFF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -343181 for 3279 contacts (-104.7/contact) +
2D Compatibility (PS) -39111 + (NN) 6121 + (LL) 752
1D Compatibility (HY) -40800 + (ID) 5050
Total energy: -421269.0 ( -128.47 by residue)
QMean score : 0.282
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