Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLIERLSGRIINRKTGETFHKVFNPP-----VDYKEEDYYQREDDKPETVKRRLDVNIAQGEPILEHYRKLGLVTDIEGNQEITEVFADVEKALLELK
2OSB Chain:A ((1-216))
MNLVLMGLPGAGKGTLGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDD-CERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQRDIQDVYADVKDLLGGLK
General information:
TITO was launched using:
RESULT:
Template:
2OSB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62057 for 1645 contacts (-37.7/contact) +
2D Compatibility (PS) -22927 + (NN) -10904 + (LL) 204
1D Compatibility (HY) -22800 + (ID) 6150
Total energy: -124634.0 ( -75.77 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_2OSB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OSB-query.scw
PDB file :
Tito_Scwrl_2OSB.pdb
: