Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKYVKWLIPISIIGMLLAGCQMNSESKSQSNEVKNSKHSAVKKDKKMTKKEQLVYLNEHEQ
2P8Q Chain:B ((26-64))
-----------------------PRLSQYKSKYSSLEQSERRRRLLELQKSKRLDYVNHARR
General information:
TITO was launched using:
RESULT:
Template:
2P8Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13540 for 137 contacts (98.8/contact) +
2D Compatibility (PS) -4242 + (NN) -3212 + (LL) 2408
1D Compatibility (HY) -400 + (ID) 300
Total energy: 7794.0 ( 56.89 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_2P8Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P8Q-query.scw
PDB file :
Tito_Scwrl_2P8Q.pdb
: