Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTKVEEIRSYLIASIQNGKLAPGDRLPSIRQLANQFSCNKDTVQRVLMELRFDNYVYAKPRSGYYV--FDSHEEEVEEGVSLPN--SEIANIAYDDFRLCLNETLIGREDYLFNYYYRQE------------------GLLDLSKAVAKLMEET-GVYVPLDDIVITAGTQQALFILTQVTFPNRKSRVLIEEPTYPRMIELIKTQNLPYETISRGTHGIDFQRLEEIFQTQSIKFFYVIPRMHNPLGTSYNPV--EMKRLIEMAEKYDVYIVEDDYMSDFA----SQSPLHYYDTHGRVIYLKSFSKAIFPALRLAAICLPQALKSTFMAYKKLMDYD---TNLILQKALALYIENGLYGKNSQYLKYRYQKDLANSKSILADQPNLPPYSLHHDSVLFDCSKLDNFKILRQYGDTLENYFCQKSHQSLLQVKNDSCLKQFLGSL |
| 4N0B Chain:A ((18-373)) | -----QQIYQKLKKEILSRNLLPHSKVPSKRELAENLKVSVNSVNSAYQQLLAEGYLYAIERKGFFVEELDMFSAEEHPPFALPDDLKEI-HIDQSDW-ISFSHMSSDTDHFPIKSWFRCEQKAASRSYRTLGDMSHPQGIYEVRAAITRLISLTRGVKCRPEQMIIGAGTQVLMQLLTEL-LP-KEAVYAMEEPGYRRMYQLLKNAGKQVKTIMLDEKGMS---IAEITRQQP-DVLVTTPSHQFPSGT-IMPVSRRIQLLNWAAEEPRRYIIEDDYDSEFTYDVDSIPALQSLDRFQNVIYMGTFSKSLLPGLRISYMVLPPEL---LRAYKQ-RGYDLQTCSSLTQLTLQEFIESGEYQKHIKKMKQHYKEKRERLITALEAEFSGEVTVKGANAGLHFVTEFDTRRTEQDILSHAAGLQLEIFGMSRFNLKETGRPALIIGFA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4N0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -187201 for 2317 contacts (-80.8/contact) +
2D Compatibility (PS) -36265 + (NN) -23132 + (LL) 1716
1D Compatibility (HY) -22800 + (ID) 5100
Total energy: -272782.0 ( -117.73 by residue)
QMean score : 0.490
|
|
|