Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEDQKHPFFEPKKETDGLEFKDAKEMTVEEAVRKDSEIKAGITEEDSILDKYIKQHRDEVASQKFETKSSDFANLDTASLDDFIKKQREELSAMLAAEELSKKLDNSVSQEQDTEANAVSPKEESSQEQENSVTPVPPLNTEAEPTATEPDSTIADSEEYKSSSKKRGGIVGTLIALILLLIVAIFGYNYFKNNNSTNSQTATSQSSSSKATTTSSEEDKKASQNLDNFNKSYANFFVDDKKTQLKNSEFDKLSELEKKVDALKGTKYYGKVKVKFDSLKRQIDAVKAVNDKFKSPAVVDGKKSEKLEVKDGANFDSLDSKTLNTGNASLDSLLHSIVSTGRNQVKQSEEQASSNKVSDTQITEQPNVTNGQSSSSAATINNQAAGTASGNLERNRSRVPYNNAAIADTGNPAWIFNPGVLEKIVATSQARGYFSGNNYILEPVNIINGNGYYN---MFKLDG------------TYLFSINAKTGYFVGNAPGRADSLDY |
| 3UHM Chain:A ((187-267)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RARTFG---FMRDIEYLRSQNLALGG--SVENAIVVDENRVLNEDGLRYEDEFVKHKILDAIGDLYLLGN-SLIGEFRGFKSGHALNNQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10541 for 298 contacts (-35.4/contact) +
2D Compatibility (PS) -7135 + (NN) -3653 + (LL) 21956
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -1273.0 ( -4.27 by residue)
QMean score : 0.038
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